Recently, crossbreeding between Asian rice (O. sativa) and African rice (O. glaberrima) has become an important solution for hunger refugees and food problems in Africa by improving grain yield. O. glaberrima exhibits important traits such as stress tolerance, and genetic diversity evaluation and structural analysis of agronomic traits have been conducted. In this study, 11 yield-related agricultural traits were analyzed in 45 lines of O. sativa and 28 lines of O. glaberrima under Korean climatic conditions. Through cluster analysis using the investigated yield-related traits, O. sativa and O. glaberrima were grouped into clusters by characterizing the remaining traits, except for the number of spikelets, grain width, and grain thickness. The number of spikelets was highly influenced by the environment and had the greatest variation, whereas grain width showed the least variation. In addition, rice yield components are quantitative traits, and in breeding to improve yield, it is important to analyze the interaction of agricultural traits and the influence of the environment to maintain an optimal balance and improve plant potential. Although O. sativa was found to exhibit different agricultural traits depending on its ecotype, it still belonged to the same group when clustered. The results of this study provide basic information on the yield-related agronomic characteristics of O. sativa and O. glaberrima under Korean climatic conditions, suggesting that O. glaberrima can be used as breeding material to diversify Korean rice genetic resources.